![]() may look different in current CodonCode Aligner versions). Same folder where CodonCode Aligner is installed.įor help with mutation finding in CodonCode Aligner, please visit (please note that this help is slightly outdated, so some dialogs etc. This help is also available as a PDF file, which is installed automatically in the CodonCode Aligner is a sequence assembly and contig editing program for Windows and Mac OS X, with the ability to run Phred and Phrap. Aligner is compatible with Phred-Phrap and fully supports sequence quality scores, while. corrected using CodonCode Aligner software (). Using the License server from CodonCode Alignerįor additional information about specific features, you can use the help available within CodonCode Aligner ("Help" menu -> "Aligner Help."). CodonCode Aligner is a program for sequence assembly, contig editing, and mutation detection. Download : Download high-res image (171KB) Download : Download full-size image.the GenBank accession number(s) or GI number(s) you want to download. New Features added in recent CodonCode Aligner versions: 4 CodonCode Aligner User Manual Table of Contents Sequence Assembly.53 Before. ![]() The concatenated sequences were saved as nexus or fasta files, which were further converted into mega files using the MEGA11 software (Tamura et al.
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